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Results 1-17 of 17

Dynamics of SARS-CoV-2 variants of concern in vaccination model city in the State of Sao Paulo, Brazil [2022]

Slavov, Svetoslav Nanev ; La-Roque, Debora Glenda Lima de; Costa, Pericles Natan Mendes da; Santos, Elaine Vieira ; Lima, Alex Ranieri Jerônimo ; Ribeiro, Gabriela ; Lima, Loyze Paola Oliveira de ; Marqueze, Elaine Cristina ; Barros, Claudia Renata dos Santos ; Martins, Antonio Jorge ; Elias, Maria Carolina ; Sampaio, Sandra Coccuzzo ; Covas, Dimas Tadeu
Viruses 2022 Sept; 14(10):2148

Epidemiological and genomic analysis of asymptomatic SARS-CoV-2 infections during the delta and omicron epidemic waves in São Paulo City, Brazil [2023]

Slavov, Svetoslav Nanev ; Lima, Alex Ranieri Jerônimo ; Ribeiro, Gabriela ; Lima, Loyze Paola Oliveira de ; Barros, Claudia Renata dos Santos ; Marqueze, Elaine Cristina ; Martins, Antonio Jorge ; Sampaio, Sandra Coccuzzo ; Elias, Maria Carolina
Viruses 2023, Nov; 15, 11: 123420

Epidemiological Week for ncov pipeline [2021]

Ribeiro, Gabriela ; Lima, Alex Ranieri Jerônimo
Dataset

Epidemiology of the SARS-CoV-2 Omicron variant emergence in the Southeast Brazilian population [2024]

Rodrigues, Evandra Strazza; Slavov, Svetoslav Nanev; La Roque, Debora Glenda Lima de; Santos, Elaine Vieira ; Oliveira, Renata Aparecida Machado ; Junior, Wilson Lau ; Lima, Alex Ranieri Jerônimo ; Ribeiro, Gabriela ; Viala, Vincent Louis ; Lima, Loyze Paola Oliveira de ; Martins, Antonio Jorge ; Barros, Claudia Renata dos Santos ; Marqueze, Elaine Cristina ; Bernardino, Jardelina de Souza Todão ; Sampaio, Sandra Coccuzzo ; Elias, Maria Carolina
Microorganisms 2024 Feb; 12(3):449

Exploring viral metagenomics in pediatric patients with acute respiratory infections: Unveiling pathogens beyond SARS-CoV-2 [2023]

Campos, Gabriel Montenegro de; La-Roque, Debora Glenda Lima de; Lima, Alex Ranieri Jerônimo ; Carvalho, Eneas ; Lima, Loyze Paola Oliveira de ; Neto, Pedro de Queiroz Cattony ; Santos, Murilo Marconi dos ; Elias, Maria Carolina ; Sampaio, Sandra Coccuzzo ; Covas, Dimas Tadeu ; Slavov, Svetoslav Nanev
Microorganisms 2023 Nov; 11 (11):2744

Genomic monitoring of the SARS-CoV-2 B1.1.7 (WHO VOC Alpha) in the Sao Paulo state, Brazil [2022]

Slavov, Svetoslav Nanev ; Bezerra, Rafael dos Santos; Rodrigues, Evandra Strazza; Lima, Alex Ranieri Jerônimo ; Viala, Vincent Louis ; Lima, Loyze Paola Oliveira de ; Martins, Antonio Jorge ; Barros, Claudia Renata dos Santos ; Marqueze, Elaine Cristina ; Bernardino, Jardelina de Souza Todão ; Moretti, Debora Botequio ; Machado Neto, Raul ; Covas, Dimas Tadeu ; Sampaio, Sandra Coccuzzo ; Elias, Maria Carolina
Virus Res 2022 Jan; 308:198643

Integrating high-throughput analysis to create an atlas of replication origins in Trypanosoma cruzi in the context of genome structure and variability [2024]

Vitarelli, Marcela de Oliveira Vitarelli; Franco, Thiago Andrade; Pires, David da Silva ; Lima, Alex Ranieri Jerônimo ; Viala, Vincent Louis ; Kraus, Amelie Johanna; Junqueira-de-Azevedo, Inácio de Loiola Meirelles ; Da Cunha, Julia Pinheiro Chagas ; Elias, Maria Carolina
mBio 2024 Feb; 15(4):e00319-24

Lacen Alagoas [2021]

Ribeiro, Gabriela ; Lima, Alex Ranieri Jerônimo
Dataset

A new lineage nomenclature to aid genomic surveillance of dengue virus [2024]

Hill, Verity; Cleemput, Sara; Pereira, James Siqueira; Ribeiro, Gabriela ; Souza, Vinicius Carius de; Brcko, Isabela Carvalho ; Ribeiro, Igor Santana; Lima, Iago Trezena Tavares de; Slavov, Svetoslav Nanev ; Sampaio, Sandra Coccuzzo ; Elias, Maria Carolina ; Lima, Alex Ranieri Jerônimo
Plos Biol 2024 Set; 22(9):e3002834

Nucleosome landscape reflects phenotypic differences in Trypanosoma cruzi life forms [2021]

Lima, Alex Ranieri Jerônimo ; de Araujo, Christiane Bezerra ; Poubel, Saloê Bispo ; Patané, José Salvatore Leister ; Silber, Ariel M.; Elias, Maria Carolina ; Da Cunha, Julia Pinheiro Chagas
PLoS Pathog 2021 Jan;17(1):e1009272

Open chromatin analysis in Trypanosoma cruzi life forms highlights critical differences in genomic compartments and developmental regulation at tDNA loci [2022]

Lima, Alex Ranieri Jerônimo ; Silva, Herbert Guimarães de Sousa; Poubel, Saloê Bispo ; Lima, Loyze Paola Oliveira de ; Costa-Silva, Héllida Marina ; Elias, Maria Carolina ; Da Cunha, Julia Pinheiro Chagas
Epigenetics & Chromatin 2022 July;15:25

Replication origin location might contribute to genetic variability in Trypanosoma cruzi [2020]

de Araujo, Christiane Bezerra ; da Cunha, Julia Pinheiro Chagas ; Inada, Davi Toshio ; Damasceno, Jeziel; Lima, Alex Ranieri Jerônimo ; Hiraiwa, Priscila; Marques, Catarina; Gonçalves, Evonnildo; Nishiyama Junior, Milton Yutaka ; McCulloch, Richard D.; Elias, Maria Carolina
BMC Genomics 2020 Jun;21:414

Retrospective insights of the COVID-19 epidemic in the major latin American city, São Paulo, Southeastern Brazil [2023]

Patricia Akemi Assato; Luan Gaspar Clemente; Marta Giovanetti; Ribeiro, Gabriela ; Lima, Alex Ranieri Jerônimo ; Martins, Antonio Jorge ; Barros, Claudia Renata dos Santos ; Moretti, Debora Botequio ; Marqueze, Elaine Cristina ; Bernardino, Jardelina de Souza Todão ; Lima, Loyze Paola Oliveira de ; Neto, Pedro de Queiroz Cattony ; Viala, Vincent Louis ; Machado Neto, Raul ; Covas, Dimas Tadeu ; Sampaio, Sandra Coccuzzo ; Elias, Maria Carolina
Viruses 2023 Jan; 15(2):327

Retrospective spatio-temporal dynamics of dengue virus 1, 2 and 4 in Paraguay [2023]

Vazquez, Cynthia; Alcantara, Luiz Carlos Junior; Fonseca, Vagner; Lima, Alex Ranieri Jerônimo ; Elias, Maria Carolina ; Sampaio, Sandra Coccuzzo
Viruses 2023 May; 15(6):1275

The divergent pattern of SARS-CoV-2 variant predominance and transmission dynamics in the Brazilian island of Ilhabela [2022]

Viala, Vincent Louis ; Slavov, Svetoslav Nanev; Lima, Loyze Paola Oliveira de ; Lima, Alex Ranieri Jerônimo ; Ribeiro, Gabriela ; Martins, Antonio Jorge ; Barros, Claudia Renata dos Santos ; Moretti, Debora Botequio ; Marqueze, Elaine Cristina ; Bernardino, Jardelina de Souza Todão ; Machado Neto, Raul ; Covas, Dimas Tadeu ; Elias, Maria Carolina ; Sampaio, Sandra Coccuzzo
Viruses 2022 July;14(7):1481

A traveling SARS-CoV-2 laboratory as part of a pandemic response among vulnerable Brazilian populations [2023]

Elias, Maria Carolina ; Slavov, Svetoslav Nanev; Lima, Alex Ranieri Jerônimo ; Martins, Antonio Jorge ; Barros, Claudia Renata dos Santos ; Moretti, Debora Botequio ; Marqueze, Elaine Cristina ; Ribeiro, Gabriela ; Ribeiro, Gabriela Mauric Frossard ; Bernardino, Jardelina de Souza Todão ; Koser, Jaqueline Reginato ; Crispin, Luiz Aurelio Campos ; Silva, Quetura Oliveira ; Machado Neto, Raul ; Haddad, Ricardo ; Viala, Vincent Louis ; Covas, Dimas Tadeu ; Sampaio, Sandra Coccuzzo
BMC Public Health 2023 Jan; 23:15

Unveiling viral pathogens in acute respiratory disease: insights from viral metagenomics in patients from the State of Alagoas, Brazil [2024]

Campos, Gabriel Montenegro de; Santos, Hazerral de Oliveira; Lima, Alex Ranieri Jerônimo ; Ribeiro, Gabriela ; Bernardino, Jardelina de Souza Todão ; Lima, Loyze Paola Oliveira de ; Kallás, Esper George ; Sampaio, Sandra Coccuzzo ; Elias, Maria Carolina ; Slavov, Svetoslav Nanev
Plos Neglect Trop Dis 2024 Set; 18(9):e0012536