In silico analysis of Leptospira interrogans GroEL


Responsible researcher
Butantan affiliation
Publication type
Dataset
Language
English
File format
txt, pdf, pdb, png
Updated on
19-Mar-2021
Access rights
Open Access
Appears in Collections:
Dataset description
Alignment (.txt files): Analysis of similarity between protein sequences performed by Basic Local Alignment Search Tool (https://blast.ncbi.nlm.nih.gov/Blast.cgi?PAGE=Proteins). Clustal Omega files (.pdf): Multiple sequence alignments performed by Clustal Omega program (https://www.ebi.ac.uk/Tools/msa/clustalo/). Tertiary structure prediction (.pdf .pdb .png files): Tertiary structure prediction performed by SWISS-MODEL protein homology modeling server (https://swissmodel.expasy.org/). NCBI Conserved Domain Search (pdf file): Identification of putative conserved domains in GroEL sequences using the Conserved Domain Database.
Reference
Abreu, PAE. In silico analysis of Leptospira interrogans GroEL [Dataset]. Instituto Butantan Repository. 2021.
Link to cite this reference
https://repositorio.butantan.gov.br/handle/butantan/3635
FAPESP grants
2010/51215-9;  2019/00546-0;  2019/09804-1
Issue Date
2021


Files in This Item:

1_Ecoli_Taxid_562_Alignment.txt
Description:
Size: 247.39 kB
Format: Text
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2_Human_Taxid_9606_ Alignment.txt
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Size: 47.7 kB
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3_Termophilus_Taxid_274_Alignment.txt
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Size: 21.09 kB
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Clustal Omega Analysis 1.pdf
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Size: 403.98 kB
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Clustal Omega Analysis 2.pdf
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Size: 409.05 kB
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L alexanderi_Alignment.txt
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Size: 3.23 kB
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L alstonii_Alignment.txt
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Size: 5.81 kB
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L biflexa_Alignment.txt
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Size: 7.5 kB
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L borgpetersenii_Alignment.txt
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Size: 7.1 kB
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L interrogans_Alignment.txt
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Size: 56.11 kB
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L kirschneri_Alignment.txt
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Size: 10.02 kB
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L kmetyi_Alignment.txt
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Size: 3.51 kB
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L meyeri_Alignment.txt
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Size: 3.37 kB
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L noguchii_Alignment.txt
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Size: 11.48 kB
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L santarosai_Alignment.txt
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Size: 11.27 kB
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L terpstrae_Alignment.txt
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Size: 3.13 kB
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L vanthielii_Alignment.txt
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Size: 3.21 kB
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L weilii_Alignment.txt
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Size: 13.17 kB
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L wolbachii_Alignment.txt
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Size: 3.11 kB
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L wolffii_Alignment.txt
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Size: 5.87 kB
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L yanagawae_Alignment.txt
Description:
Size: 3.21 kB
Format: Text
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NCBI Conserved Domain Search.pdf
Description:
Size: 308.69 kB
Format: Adobe PDF
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Tertiary GroEL structure.png
Description:
Size: 919.38 kB
Format: image/png
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Tertiary structure prediction GroEL _ Report.pdf
Description:
Size: 1.2 MB
Format: Adobe PDF
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Tertiary structure prediction model.pdb.pdf
Description:
Size: 647.85 kB
Format: Adobe PDF
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